MolNFT v1 · #443179 · protein
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q12U25)
Q12U25: “AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q12U25)”. 5 pockets (best druggability 0.73). MolNFT v1 #443179 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q12U25
- Type
- protein
- Length
- 923 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q12U25
- Pockets
- 5 · best druggability 0.73
Structure
1 distinct chain · 42% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 923 | 42% helix, 24% strand | Q12U25 |
Pockets
5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 578 | 0.73 | 0.81 | 61 | empty |
| 2 | 741 | 0.71 | 0.78 | 90 | empty |
| 3 | 365 | 0.65 | 0.80 | 52 | empty |
| 4 | 265 | 0.58 | 0.78 | 28 | empty |
| 5 | 79 | 0.34 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12U25
- Elsewhere: UniProt Q12U25 · AlphaFold DB Q12U25
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