MolNFT v1 · #434135 · protein

AlphaFold monomer V2.0 prediction for biosynthetic arginine decarboxylase (P21170)

P21170: “AlphaFold monomer V2.0 prediction for biosynthetic arginine decarboxylase (P21170)”. 5 pockets (best druggability 0.56). MolNFT v1 #434135 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P21170
Type: protein
Length: 658 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x5b13c9115B53001a236cd5DD3D2992124e9b8fF1
Molecule: Biosynthetic arginine decarboxylase
UniProt: P21170
Pockets: 5 · best druggability 0.56

Structure

1 distinct chain · 43% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Biosynthetic arginine decarboxylase	protein	658	43% helix, 17% strand	P21170

Pockets

5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	229	0.56	0.78	33	empty
2	143	0.53	0.81	26	empty
3	239	0.51	0.75	30	empty
4	53	0.45	0.84	20	empty
5	96	0.37	0.75	19	empty

Compared structures

3NZQ · Crystal Structure of Biosynthetic arginine decarboxylase ADC (SpeA) from Escherichia… · an experimental structure of the same protein · chain A against A, TM-score 0.91
3NZQ · Crystal structure of biosynthetic arginine decarboxylase adc (spea) from escherichia… · an experimental structure of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P21170
Elsewhere: UniProt P21170 · AlphaFold DB P21170

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