MolNFT v1 · #434108 · protein
AlphaFold monomer V2.0 prediction for spermatogenesis-defective protein 39 homolog (Q8BGQ1)
Q8BGQ1: “AlphaFold monomer V2.0 prediction for spermatogenesis-defective protein 39 homolog (Q8BGQ1)”. 6 pockets (best druggability 0.68). MolNFT v1 #434108 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8BGQ1
- Type
- protein
- Length
- 491 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Spermatogenesis-defective protein 39 homolog
- UniProt
- Q8BGQ1
- Pockets
- 6 · best druggability 0.68
Structure
1 distinct chain · 51% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Spermatogenesis-defective protein 39 homolog | protein | 491 | 51% helix, 2% strand | Q8BGQ1 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 448 | 0.68 | 0.79 | 36 | empty |
| 2 | 492 | 0.63 | 0.75 | 33 | empty |
| 3 | 131 | 0.41 | 0.75 | 19 | empty |
| 4 | 117 | 0.38 | 0.74 | 21 | empty |
| 5 | 53 | 0.27 | 0.74 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BGQ1
- Elsewhere: UniProt Q8BGQ1 · AlphaFold DB Q8BGQ1
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