MolNFT v1 · #425839 · protein
AlphaFold monomer V2.0 prediction for semaphorin-4D (Q90665)
Q90665: “AlphaFold monomer V2.0 prediction for semaphorin-4D (Q90665)”. 5 pockets (best druggability 0.46). MolNFT v1 #425839 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q90665
- Type
- protein
- Length
- 295 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x29a60d0E157599CBf300583Ae4565f927501c9E1
- Molecule
- Semaphorin-4D
- UniProt
- Q90665
- Pockets
- 5 · best druggability 0.46
Structure
1 distinct chain · 14% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Semaphorin-4D | protein | 295 | 14% helix, 40% strand | Q90665 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 120 | 0.46 | 0.78 | 25 | empty |
| 2 | 56 | 0.37 | 0.80 | 24 | empty |
| 3 | 88 | 0.35 | 0.75 | 14 | empty |
| 4 | 74 | 0.31 | 0.73 | 15 | empty |
| 5 | 55 | 0.26 | 0.73 | 19 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q90665
- Elsewhere: UniProt Q90665 · AlphaFold DB Q90665
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