MolNFT v1 · #425382 · protein

AlphaFold monomer V2.0 prediction for selenide, water dikinase (P16456)

P16456: “AlphaFold monomer V2.0 prediction for selenide, water dikinase (P16456)”. 2 pockets (best druggability 0.65). MolNFT v1 #425382 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P16456
Type: protein
Length: 347 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x0E985Db56B2E3a1d939426DBE6C7952D7AaC1F01
Molecule: Selenide, water dikinase
UniProt: P16456
Pockets: 2 · best druggability 0.65

Structure

1 distinct chain · 38% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Selenide, water dikinase	protein	347	38% helix, 23% strand	P16456

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	427	0.65	0.78	39	empty
2	60	0.37	0.79	18	empty

Compared structures

3U0O · The crystal structure of selenophosphate synthetase from E. coli · an experimental structure of the same protein · chain A against B, TM-score 0.91
3U0O · The crystal structure of selenophosphate synthetase from E. COLI · an experimental structure of the same protein · chain A against B, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P16456
Elsewhere: UniProt P16456 · AlphaFold DB P16456

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