MolNFT v1 · #425214 · protein
AlphaFold monomer V2.0 prediction for nucleoporin SEH1 (P53011)
P53011: “AlphaFold monomer V2.0 prediction for nucleoporin SEH1 (P53011)”. 1 pocket (best druggability 0.72). MolNFT v1 #425214 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P53011
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Nucleoporin SEH1
- UniProt
- P53011
- Pockets
- 1 · best druggability 0.72
Structure
1 distinct chain · 3% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoporin SEH1 | protein | 349 | 3% helix, 46% strand | P53011 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 821 | 0.72 | 0.77 | 46 | empty |
Compared structures
- 6X08 · NUP85-SEH1 from S. cerevisiae bound by vhh-SAN2 · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 3F3P · Crystal structure of the nucleoporin pair Nup85-Seh1, space group P21212 · an experimental structure of the same protein · chain A against F, TM-score 0.87
- 3F3P · Crystal structure of the nucleoporin pair NUP85-SEH1, space group P21212 · an experimental structure of the same protein · chain A against F, TM-score 0.87
- 3F3F · Crystal structure of the nucleoporin pair Nup85-Seh1, space group P21 · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 3F3F · Crystal structure of the nucleoporin pair NUP85-SEH1, space group P21 · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 4XMM · Structure of the yeast coat nucleoporin complex, space group C2 · an experimental structure of the same protein · chain A against C, TM-score 0.87
- 4XMM · Structure of the yeast coat nucleoporin complex, space group C2 · an experimental structure of the same protein · chain A against C, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53011
- Elsewhere: UniProt P53011 · AlphaFold DB P53011
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