MolNFT v1 · #424492 · protein
AlphaFold monomer V2.0 prediction for protein-export protein secb (P44853)
P44853: “AlphaFold monomer V2.0 prediction for protein-export protein secb (P44853)”. 1 pocket (best druggability 0.31). MolNFT v1 #424492 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P44853
- Type
- protein
- Length
- 169 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- Protein-export protein secb
- UniProt
- P44853
- Pockets
- 1 · best druggability 0.31
Structure
1 distinct chain · 35% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein-export protein secb | protein | 169 | 35% helix, 36% strand | P44853 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.31 | 0.76 | 11 | empty |
Compared structures
- 1FX3 · Crystal structure of H. influenzae secb · an experimental structure of the same protein · chain A against B, TM-score 0.84
- 1FX3 · Crystal structure of H. influenzae secb · an experimental structure of the same protein · chain A against B, TM-score 0.84
- 1OZB · Crystal structure of secb complexed with seca C-terminus · an experimental structure of the same protein · chain A against A, TM-score 0.83
- 1OZB · Crystal Structure of SecB complexed with SecA C-terminus · an experimental structure of the same protein · chain A against A, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P44853
- Elsewhere: UniProt P44853 · AlphaFold DB P44853
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