MolNFT v1 · #423605 · protein
AlphaFold monomer V2.0 prediction for protein translocase subunit seca 2 (P9WGP3)
P9WGP3: “AlphaFold monomer V2.0 prediction for protein translocase subunit seca 2 (P9WGP3)”. 11 pockets (best druggability 0.80). MolNFT v1 #423605 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P9WGP3
- Type
- protein
- Length
- 808 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Protein translocase subunit seca 2
- UniProt
- P9WGP3
- Pockets
- 11 · best druggability 0.80
Structure
1 distinct chain · 48% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca 2 | protein | 808 | 48% helix, 13% strand | P9WGP3 |
Pockets
11 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 692 | 0.80 | 0.85 | 71 | empty |
| 2 | 305 | 0.73 | 0.86 | 49 | empty |
| 3 | 273 | 0.71 | 0.85 | 36 | empty |
| 4 | 323 | 0.63 | 0.80 | 40 | empty |
| 5 | 110 | 0.60 | 0.86 | 22 | empty |
Compared structures
- 4UAQ · Crystal structure of the accessory translocation ATPase, SecA2, from Mycobacterium… · an experimental structure of the same protein · chain A against A, TM-score 0.74
- 4UAQ · Crystal structure of the accessory translocation ATPase, SECA2, from mycobacterium… · an experimental structure of the same protein · chain A against A, TM-score 0.74
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WGP3
- Elsewhere: UniProt P9WGP3 · AlphaFold DB P9WGP3
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