MolNFT v1 · #421510 · protein
AlphaFold monomer V2.0 prediction for sodium channel protein type 4 subunit alpha (Q28371)
Q28371: “AlphaFold monomer V2.0 prediction for sodium channel protein type 4 subunit alpha (Q28371)”. 20 pockets (best druggability 0.86). MolNFT v1 #421510 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q28371
- Type
- protein
- Length
- 1,834 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- Sodium channel protein type 4 subunit alpha
- UniProt
- Q28371
- Pockets
- 20 · best druggability 0.86
Structure
1 distinct chain · 58% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium channel protein type 4 subunit alpha | protein | 1834 | 58% helix, 3% strand | Q28371 |
Pockets
20 pockets found on a 1 Å grid, 17 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1012 | 0.86 | 0.86 | 85 | empty |
| 2 | 727 | 0.72 | 0.78 | 61 | empty |
| 3 | 636 | 0.71 | 0.78 | 48 | empty |
| 4 | 422 | 0.68 | 0.80 | 38 | empty |
| 5 | 664 | 0.68 | 0.76 | 55 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q28371
- Elsewhere: UniProt Q28371 · AlphaFold DB Q28371
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