MolNFT v1 · #420408 · protein
AlphaFold monomer V2.0 prediction for DNA-binding protein SATB1 (Q01826)
Q01826: “AlphaFold monomer V2.0 prediction for DNA-binding protein SATB1 (Q01826)”. 7 pockets (best druggability 0.67). MolNFT v1 #420408 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q01826
- Type
- protein
- Length
- 763 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- DNA-binding protein SATB1
- UniProt
- Q01826
- Pockets
- 7 · best druggability 0.67
Structure
1 distinct chain · 40% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-binding protein SATB1 | protein | 763 | 40% helix, 6% strand | Q01826 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 439 | 0.67 | 0.79 | 36 | empty |
| 2 | 224 | 0.55 | 0.78 | 29 | empty |
| 3 | 163 | 0.42 | 0.74 | 23 | empty |
| 4 | 104 | 0.33 | 0.72 | 19 | empty |
| 5 | 91 | 0.33 | 0.73 | 21 | empty |
Compared structures
- 3TUO · Crystal structure of N-terminal domain of DNA-binding protein satb1 · an experimental structure of the same protein · chain A against A, TM-score 0.13
- 3TUO · Crystal structure of N-terminal domain of DNA-binding protein SATB1 · an experimental structure of the same protein · chain A against A, TM-score 0.13
- 1YSE · Solution structure of the mar-binding domain of SATB1 · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 1YSE · Solution structure of the MAR-binding domain of SATB1 · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 2O4A · Crystal Structure of the N-terminal CUT Domain of SATB1 Bound to Matrix Attachment Region… · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 2O4A · Crystal structure of the N-terminal cut domain of SATB1 bound to matrix attachment region… · an experimental structure of the same protein · chain A against A, TM-score 0.11
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q01826
- Elsewhere: UniProt Q01826 · AlphaFold DB Q01826
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