MolNFT v1 · #419464 · protein
AlphaFold monomer V2.0 prediction for capsular polysaccharide phosphotransferase sacb (Q84D00)
Q84D00: “AlphaFold monomer V2.0 prediction for capsular polysaccharide phosphotransferase sacb (Q84D00)”. 7 pockets (best druggability 0.80). MolNFT v1 #419464 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q84D00
- Type
- protein
- Length
- 545 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x708991C18002eAd38E7258F3BB93Ec77Dc86b9B5
- Molecule
- Capsular polysaccharide phosphotransferase sacb
- UniProt
- Q84D00
- Pockets
- 7 · best druggability 0.80
Structure
1 distinct chain · 38% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Capsular polysaccharide phosphotransferase sacb | protein | 545 | 38% helix, 17% strand | Q84D00 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 525 | 0.80 | 0.87 | 52 | empty |
| 2 | 936 | 0.71 | 0.75 | 72 | empty |
| 3 | 517 | 0.62 | 0.75 | 44 | empty |
| 4 | 69 | 0.41 | 0.80 | 18 | empty |
| 5 | 94 | 0.35 | 0.74 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84D00
- Elsewhere: UniProt Q84D00 · AlphaFold DB Q84D00
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