MolNFT v1 · #419313 · protein
AlphaFold monomer V2.0 prediction for sodium- and chloride-dependent GABA transporter 2 (Q9NSD5)
Q9NSD5: “AlphaFold monomer V2.0 prediction for sodium- and chloride-dependent GABA transporter 2 (Q9NSD5)”. 5 pockets (best druggability 0.82). MolNFT v1 #419313 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9NSD5
- Type
- protein
- Length
- 602 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Sodium- and chloride-dependent GABA transporter 2
- UniProt
- Q9NSD5
- Pockets
- 5 · best druggability 0.82
Structure
1 distinct chain · 66% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium- and chloride-dependent GABA transporter 2 | protein | 602 | 66% helix, 2% strand | Q9NSD5 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 902 | 0.82 | 0.84 | 72 | empty |
| 2 | 221 | 0.67 | 0.85 | 28 | empty |
| 3 | 130 | 0.38 | 0.74 | 18 | empty |
| 4 | 95 | 0.35 | 0.74 | 15 | empty |
| 5 | 60 | 0.30 | 0.75 | 14 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NSD5
- Elsewhere: UniProt Q9NSD5 · AlphaFold DB Q9NSD5
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