MolNFT v1 · #419287 · protein
AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit alpha isoform 2 (Q5NVM7)
Q5NVM7: “AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit alpha isoform 2 (Q5NVM7)”. 5 pockets (best druggability 0.77). MolNFT v1 #419287 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5NVM7
- Type
- protein
- Length
- 476 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Protein transport protein SEC61 subunit alpha isoform 2
- UniProt
- Q5NVM7
- Pockets
- 5 · best druggability 0.77
Structure
1 distinct chain · 63% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein transport protein SEC61 subunit alpha isoform 2 | protein | 476 | 63% helix, 7% strand | Q5NVM7 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1040 | 0.77 | 0.79 | 85 | empty |
| 2 | 476 | 0.64 | 0.76 | 51 | empty |
| 3 | 63 | 0.46 | 0.83 | 17 | empty |
| 4 | 81 | 0.37 | 0.76 | 13 | empty |
| 5 | 68 | 0.31 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NVM7
- Elsewhere: UniProt Q5NVM7 · AlphaFold DB Q5NVM7
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