MolNFT v1 · #418572 · protein
AlphaFold monomer V2.0 prediction for sphingosine 1-phosphate receptor 5 (Q684M3)
Q684M3: “AlphaFold monomer V2.0 prediction for sphingosine 1-phosphate receptor 5 (Q684M3)”. 4 pockets (best druggability 0.82). MolNFT v1 #418572 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q684M3
- Type
- protein
- Length
- 398 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Sphingosine 1-phosphate receptor 5
- UniProt
- Q684M3
- Pockets
- 4 · best druggability 0.82
Structure
1 distinct chain · 60% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sphingosine 1-phosphate receptor 5 | protein | 398 | 60% helix, 1% strand | Q684M3 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 454 | 0.82 | 0.89 | 50 | empty |
| 2 | 149 | 0.51 | 0.78 | 28 | empty |
| 3 | 64 | 0.33 | 0.76 | 11 | empty |
| 4 | 54 | 0.26 | 0.73 | 12 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q684M3
- Elsewhere: UniProt Q684M3 · AlphaFold DB Q684M3
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