MolNFT v1 · #415135 · protein
AlphaFold monomer V2.0 prediction for RNA 3'-terminal phosphate cyclase (O59198)
O59198: “AlphaFold monomer V2.0 prediction for RNA 3'-terminal phosphate cyclase (O59198)”. 2 pockets (best druggability 0.65). MolNFT v1 #415135 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- O59198
- Type
- protein
- Length
- 341 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- RNA 3'-terminal phosphate cyclase
- UniProt
- O59198
- Pockets
- 2 · best druggability 0.65
Structure
1 distinct chain · 34% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA 3'-terminal phosphate cyclase | protein | 341 | 34% helix, 30% strand | O59198 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 432 | 0.65 | 0.78 | 39 | empty |
| 2 | 52 | 0.27 | 0.74 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 4O8J · Crystal structure of rtca, the RNA 3'-terminal phosphate cyclase from pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 4O8J · Crystal structure of RtcA, the RNA 3'-terminal phosphate cyclase from Pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 4O89 · Crystal structure of RtcA, the RNA 3'-terminal phosphate cyclase from Pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4O89 · Crystal structure of rtca, the RNA 3'-terminal phosphate cyclase from pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O59198
- Elsewhere: UniProt O59198 · AlphaFold DB O59198
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.