MolNFT v1 · #413973 · protein
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase J (B2SEQ2)
B2SEQ2: “AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase J (B2SEQ2)”. 3 pockets (best druggability 0.62). MolNFT v1 #413973 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B2SEQ2
- Type
- protein
- Length
- 241 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Ribosomal RNA small subunit methyltransferase J
- UniProt
- B2SEQ2
- Pockets
- 3 · best druggability 0.62
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase J | protein | 241 | 33% helix, 25% strand | B2SEQ2 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 353 | 0.62 | 0.78 | 39 | empty |
| 2 | 54 | 0.53 | 0.89 | 24 | empty |
| 3 | 93 | 0.42 | 0.78 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2SEQ2
- Elsewhere: UniProt B2SEQ2 · AlphaFold DB B2SEQ2
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