MolNFT v1 · #413739 · protein
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase H (P0DC36)
P0DC36: “AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase H (P0DC36)”. 4 pockets (best druggability 0.75). MolNFT v1 #413739 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0DC36
- Type
- protein
- Length
- 316 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9073C46348542FfE4327c3F363F9B51B22058e75
- Molecule
- Ribosomal RNA small subunit methyltransferase H
- UniProt
- P0DC36
- Pockets
- 4 · best druggability 0.75
Structure
1 distinct chain · 46% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase H | protein | 316 | 46% helix, 15% strand | P0DC36 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 421 | 0.75 | 0.85 | 52 | empty |
| 2 | 62 | 0.31 | 0.76 | 18 | empty |
| 3 | 52 | 0.31 | 0.77 | 14 | empty |
| 4 | 60 | 0.27 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DC36
- Elsewhere: UniProt P0DC36 · AlphaFold DB P0DC36
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