MolNFT v1 · #412330 · protein
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase F (Q0HJM6)
Q0HJM6: “AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase F (Q0HJM6)”. 5 pockets (best druggability 0.59). MolNFT v1 #412330 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q0HJM6
- Type
- protein
- Length
- 481 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC606db5d7951E377c0b60355c2373fBEaCA99f62
- Molecule
- Ribosomal RNA small subunit methyltransferase F
- UniProt
- Q0HJM6
- Pockets
- 5 · best druggability 0.59
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase F | protein | 481 | 33% helix, 25% strand | Q0HJM6 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 260 | 0.59 | 0.79 | 47 | empty |
| 2 | 235 | 0.50 | 0.75 | 40 | empty |
| 3 | 68 | 0.40 | 0.79 | 23 | empty |
| 4 | 53 | 0.39 | 0.81 | 14 | empty |
| 5 | 54 | 0.34 | 0.78 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0HJM6
- Elsewhere: UniProt Q0HJM6 · AlphaFold DB Q0HJM6
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