MolNFT v1 · #411837 · protein
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (Q56016)
Q56016: “AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (Q56016)”. 3 pockets (best druggability 0.73). MolNFT v1 #411837 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q56016
- Type
- protein
- Length
- 273 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Ribosomal RNA small subunit methyltransferase a
- UniProt
- Q56016
- Pockets
- 3 · best druggability 0.73
Structure
1 distinct chain · 41% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase a | protein | 273 | 41% helix, 20% strand | Q56016 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 167 | 0.73 | 0.91 | 34 | empty |
| 2 | 50 | 0.28 | 0.75 | 18 | empty |
| 3 | 50 | 0.26 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q56016
- Elsewhere: UniProt Q56016 · AlphaFold DB Q56016
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