MolNFT v1 · #411411 · protein
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (B3DP38)
B3DP38: “AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (B3DP38)”. 3 pockets (best druggability 0.71). MolNFT v1 #411411 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B3DP38
- Type
- protein
- Length
- 307 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2d26a86cbE380Fd92850FC0D1EFb1fe1c7915b16
- Molecule
- Ribosomal RNA small subunit methyltransferase a
- UniProt
- B3DP38
- Pockets
- 3 · best druggability 0.71
Structure
1 distinct chain · 42% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase a | protein | 307 | 42% helix, 17% strand | B3DP38 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 123 | 0.71 | 0.91 | 35 | empty |
| 2 | 70 | 0.35 | 0.77 | 13 | empty |
| 3 | 61 | 0.32 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3DP38
- Elsewhere: UniProt B3DP38 · AlphaFold DB B3DP38
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