MolNFT v1 · #411269 · protein
AlphaFold monomer V2.0 prediction for probable GTP diphosphokinase RSH3, chloroplastic (Q9M5P5)
Q9M5P5: “AlphaFold monomer V2.0 prediction for probable GTP diphosphokinase RSH3, chloroplastic (Q9M5P5)”. 7 pockets (best druggability 0.74). MolNFT v1 #411269 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9M5P5
- Type
- protein
- Length
- 712 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6ee023Ee4F7B1eb962a07dc9EdC3D746632Da792
- Molecule
- Probable GTP diphosphokinase RSH3, chloroplastic
- UniProt
- Q9M5P5
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 39% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable GTP diphosphokinase RSH3, chloroplastic | protein | 712 | 39% helix, 9% strand | Q9M5P5 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1124 | 0.74 | 0.77 | 109 | empty |
| 2 | 1085 | 0.74 | 0.77 | 90 | empty |
| 3 | 116 | 0.58 | 0.85 | 23 | empty |
| 4 | 109 | 0.49 | 0.81 | 23 | empty |
| 5 | 187 | 0.48 | 0.75 | 20 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9M5P5
- Elsewhere: UniProt Q9M5P5 · AlphaFold DB Q9M5P5
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