MolNFT v1 · #411167 · protein
AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase rsga (Q87VI5)
Q87VI5: “AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase rsga (Q87VI5)”. 4 pockets (best druggability 0.56). MolNFT v1 #411167 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q87VI5
- Type
- protein
- Length
- 343 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x206475E65AD6313c30C24977F0A8B27E078347F2
- Molecule
- Small ribosomal subunit biogenesis GTPase rsga
- UniProt
- Q87VI5
- Pockets
- 4 · best druggability 0.56
Structure
1 distinct chain · 29% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small ribosomal subunit biogenesis GTPase rsga | protein | 343 | 29% helix, 23% strand | Q87VI5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 262 | 0.56 | 0.77 | 36 | empty |
| 2 | 56 | 0.45 | 0.84 | 15 | empty |
| 3 | 174 | 0.45 | 0.75 | 20 | empty |
| 4 | 107 | 0.38 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q87VI5
- Elsewhere: UniProt Q87VI5 · AlphaFold DB Q87VI5
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