MolNFT v1 · #406230 · protein
AlphaFold monomer V2.0 prediction for 30S ribosomal protein S4 (Q8Y6T6)
Q8Y6T6: “AlphaFold monomer V2.0 prediction for 30S ribosomal protein S4 (Q8Y6T6)”. 2 pockets (best druggability 0.53). MolNFT v1 #406230 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8Y6T6
- Type
- protein
- Length
- 200 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- 30S ribosomal protein S4
- UniProt
- Q8Y6T6
- Pockets
- 2 · best druggability 0.53
Structure
1 distinct chain · 44% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 30S ribosomal protein S4 | protein | 200 | 44% helix, 10% strand | Q8Y6T6 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.53 | 0.82 | 27 | empty |
| 2 | 74 | 0.32 | 0.74 | 12 | empty |
Compared structures
- 7NHN · VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria… · an experimental structure of the same protein · chain A against e, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Y6T6
- Elsewhere: UniProt Q8Y6T6 · AlphaFold DB Q8Y6T6
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