MolNFT v1 · #405323 · protein
AlphaFold monomer V2.0 prediction for 40S ribosomal protein S3 (P62908)
P62908: “AlphaFold monomer V2.0 prediction for 40S ribosomal protein S3 (P62908)”. 1 pocket (best druggability 0.39). MolNFT v1 #405323 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P62908
- Type
- protein
- Length
- 243 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5dC362867B8F1D91BcF4e783Db45bC54097cA2a4
- Molecule
- 40S ribosomal protein S3
- UniProt
- P62908
- Pockets
- 1 · best druggability 0.39
Structure
1 distinct chain · 33% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 40S ribosomal protein S3 | protein | 243 | 33% helix, 24% strand | P62908 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 142 | 0.39 | 0.73 | 20 | empty |
Compared structures
- 7CPV · Cryo-EM structure of 80S ribosome from mouse testis · an experimental structure of the same protein · chain A against SD, TM-score 0.90
- 7LS2 · 80S ribosome from mouse bound to eEF2 (Class I) · an experimental structure of the same protein · chain A against q2, TM-score 0.90
- 7CPU · Cryo-EM structure of 80S ribosome from mouse kidney · an experimental structure of the same protein · chain A against SD, TM-score 0.89
- 7LS1 · 80S ribosome from mouse bound to eEF2 (Class II) · an experimental structure of the same protein · chain A against q2, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P62908
- Elsewhere: UniProt P62908 · AlphaFold DB P62908
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