MolNFT v1 · #404771 · protein
AlphaFold monomer V2.0 prediction for 40S ribosomal protein S1 (Q6CWD0)
Q6CWD0: “AlphaFold monomer V2.0 prediction for 40S ribosomal protein S1 (Q6CWD0)”. 1 pocket (best druggability 0.42). MolNFT v1 #404771 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q6CWD0
- Type
- protein
- Length
- 255 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x429aA010A80A47FF4a2777bB34A2bba144d19df2
- Molecule
- 40S ribosomal protein S1
- UniProt
- Q6CWD0
- Pockets
- 1 · best druggability 0.42
Structure
1 distinct chain · 27% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 40S ribosomal protein S1 | protein | 255 | 27% helix, 31% strand | Q6CWD0 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 73 | 0.42 | 0.80 | 17 | empty |
Compared structures
- 8S8K · Structure of a yeast 48S-AUC preinitiation complex in swivelled conformation (model… · an experimental structure of the same protein · chain A against B, TM-score 0.84
- 8RW1 · Structure of a yeast 48S-AUC preinitiation complex in closed conformation · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 6FYX · Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model… · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 8S8E · Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model… · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 3JAM · CryoEM structure of 40S-eIF1A-eIF1 complex from yeast · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 3JAM · Cryoem structure of 40S-EIF1A-EIF1 complex from yeast · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 8S8D · Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model… · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 6FYY · Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model… · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 8S8G · Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model… · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 8S8H · Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model… · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 8S8F · Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model… · an experimental structure of the same protein · chain A against B, TM-score 0.83
- 8S8I · Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model… · an experimental structure of the same protein · chain A against B, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6CWD0
- Elsewhere: UniProt Q6CWD0 · AlphaFold DB Q6CWD0
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