AlphaFold monomer V2.0 prediction for 40S ribosomal protein S28-a (Q3E7X9)

Structure

1 distinct chain · 0% helix, 46% strand (DSSP).

Compared structures

• 6T4Q · Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination. · an experimental structure of the same protein · chain A against Sc, TM-score 0.90
• 6T7T · Structure of yeast 80S ribosome stalled on poly(A) tract. · an experimental structure of the same protein · chain A against Sc, TM-score 0.89
• 7ZUX · Collided ribosome in a disome unit from S. cerevisiae · an experimental structure of the same protein · chain A against Dc, TM-score 0.89
• 8Y0U · dormant ribosome with STM1 · an experimental structure of the same protein · chain A against Sc, TM-score 0.88
• 7MPJ · Stm1 bound vacant 80S structure isolated from wild-type · an experimental structure of the same protein · chain A against Bc, TM-score 0.88
• 7N8B · Cycloheximide bound vacant 80S structure isolated from cbf5-D95A · an experimental structure of the same protein · chain A against Bc, TM-score 0.87
• 7ZW0 · FAP-80S Complex - Rotated state · an experimental structure of the same protein · chain A against sL, TM-score 0.87
• 8CF5 · Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2… · an experimental structure of the same protein · chain A against 4, TM-score 0.86
• 6Q8Y · Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease… · an experimental structure of the same protein · chain A against L, TM-score 0.86
• 7MPI · Stm1 bound vacant 80S structure isolated from cbf5-D95A · an experimental structure of the same protein · chain A against Bc, TM-score 0.86
• 8CCS · 80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex · an experimental structure of the same protein · chain A against 4, TM-score 0.86
• 8CGN · Non-rotated 80S S. cerevisiae ribosome with ligands · an experimental structure of the same protein · chain A against 4, TM-score 0.86

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q3E7X9
• Elsewhere: UniProt Q3E7X9 · AlphaFold DB Q3E7X9