MolNFT v1 · #400143 · protein
AlphaFold monomer V2.0 prediction for 30S ribosomal protein S17 (P24321)
P24321: “AlphaFold monomer V2.0 prediction for 30S ribosomal protein S17 (P24321)”. 1 pocket (best druggability 0.30). MolNFT v1 #400143 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P24321
- Type
- protein
- Length
- 105 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7b8e62e0dcf0Bf4048333668837dF89841F58c0C
- Molecule
- 30S ribosomal protein S17
- UniProt
- P24321
- Pockets
- 1 · best druggability 0.30
Structure
1 distinct chain · 11% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 30S ribosomal protein S17 | protein | 105 | 11% helix, 47% strand | P24321 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.30 | 0.75 | 12 | empty |
Compared structures
- 3T1Y · Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human… · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 3T1Y · Structure of the thermus thermophilus 30S ribosomal subunit complexed with a human… · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 2E5L · A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine- Dalgarno interaction · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 2E5L · A snapshot of the 30S ribosomal subunit capturing mRNA via the shine- dalgarno interaction · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 1I96 · Crystal structure of the 30S ribosomal subunit from thermus thermophilus in complex with… · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 1I96 · Crystal structure of the 30S ribosomal subunit from thermus thermophilus in complex with… · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 2VQF · Modified uridines with C5-methylene substituents at the first position of the tRNA… · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 2VQF · Modified uridines with C5-methylene substituents at the first position of the tRNA… · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 1I94 · Crystal structures of the small ribosomal subunit with tetracycline, edeine and IF3 · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 1I94 · Crystal structures of the small ribosomal subunit with tetracycline, edeine and IF3 · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 2VQE · Modified uridines with C5-methylene substituents at the first position of the tRNA… · an experimental structure of the same protein · chain A against Q, TM-score 0.95
- 2VQE · Modified uridines with C5-methylene substituents at the first position of the tRNA… · an experimental structure of the same protein · chain A against Q, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24321
- Elsewhere: UniProt P24321 · AlphaFold DB P24321
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