MolNFT v1 · #393212 · protein
AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase RRP3 (A4RGD1)
A4RGD1: “AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase RRP3 (A4RGD1)”. 7 pockets (best druggability 0.62). MolNFT v1 #393212 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A4RGD1
- Type
- protein
- Length
- 538 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- ATP-dependent rRNA helicase RRP3
- UniProt
- A4RGD1
- Pockets
- 7 · best druggability 0.62
Structure
1 distinct chain · 38% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent rRNA helicase RRP3 | protein | 538 | 38% helix, 11% strand | A4RGD1 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 213 | 0.62 | 0.82 | 27 | empty |
| 2 | 245 | 0.56 | 0.78 | 33 | empty |
| 3 | 55 | 0.49 | 0.86 | 15 | empty |
| 4 | 92 | 0.39 | 0.76 | 21 | empty |
| 5 | 79 | 0.36 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4RGD1
- Elsewhere: UniProt A4RGD1 · AlphaFold DB A4RGD1
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