MolNFT v1 · #388979 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpos (D0ZVL4)
D0ZVL4: “AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpos (D0ZVL4)”. 2 pockets (best druggability 0.69). MolNFT v1 #388979 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- D0ZVL4
- Type
- protein
- Length
- 330 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xcB690B5E3a35d70EE98529ec0d65d824111EE793
- Molecule
- RNA polymerase sigma factor rpos
- UniProt
- D0ZVL4
- Pockets
- 2 · best druggability 0.69
Structure
1 distinct chain · 62% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma factor rpos | protein | 330 | 62% helix, 1% strand | D0ZVL4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 887 | 0.69 | 0.75 | 72 | empty |
| 2 | 116 | 0.39 | 0.74 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D0ZVL4
- Elsewhere: UniProt D0ZVL4 · AlphaFold DB D0ZVL4
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