MolNFT v1 · #388791 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q9PA87)
Q9PA87: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q9PA87)”. 16 pockets (best druggability 0.79). MolNFT v1 #388791 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9PA87
- Type
- protein
- Length
- 1,407 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB8A77C885f877Ea23Ed1B779cdfDE4aA48d69ed6
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q9PA87
- Pockets
- 16 · best druggability 0.79
Structure
1 distinct chain · 39% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1407 | 39% helix, 20% strand | Q9PA87 |
Pockets
16 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1054 | 0.79 | 0.80 | 84 | empty |
| 2 | 1007 | 0.74 | 0.77 | 72 | empty |
| 3 | 616 | 0.70 | 0.77 | 41 | empty |
| 4 | 850 | 0.70 | 0.75 | 44 | empty |
| 5 | 708 | 0.68 | 0.76 | 54 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9PA87
- Elsewhere: UniProt Q9PA87 · AlphaFold DB Q9PA87
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