MolNFT v1 · #388707 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (P0DF32)
P0DF32: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (P0DF32)”. 18 pockets (best druggability 0.74). MolNFT v1 #388707 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0DF32
- Type
- protein
- Length
- 1,207 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9073C46348542FfE4327c3F363F9B51B22058e75
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- P0DF32
- Pockets
- 18 · best druggability 0.74
Structure
1 distinct chain · 44% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1207 | 44% helix, 15% strand | P0DF32 |
Pockets
18 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 891 | 0.74 | 0.78 | 82 | empty |
| 2 | 729 | 0.72 | 0.78 | 65 | empty |
| 3 | 613 | 0.70 | 0.77 | 41 | empty |
| 4 | 934 | 0.70 | 0.75 | 65 | empty |
| 5 | 214 | 0.60 | 0.81 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DF32
- Elsewhere: UniProt P0DF32 · AlphaFold DB P0DF32
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