MolNFT v1 · #388514 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q1BDE9)
Q1BDE9: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q1BDE9)”. 16 pockets (best druggability 0.74). MolNFT v1 #388514 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q1BDE9
- Type
- protein
- Length
- 1,315 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3B2F9027B14C9967255cC13a4b5F26d2c2Add9A0
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q1BDE9
- Pockets
- 16 · best druggability 0.74
Structure
1 distinct chain · 46% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1315 | 46% helix, 15% strand | Q1BDE9 |
Pockets
16 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 935 | 0.74 | 0.78 | 69 | empty |
| 2 | 1032 | 0.71 | 0.75 | 67 | empty |
| 3 | 614 | 0.70 | 0.77 | 36 | empty |
| 4 | 311 | 0.58 | 0.77 | 41 | empty |
| 5 | 162 | 0.58 | 0.82 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1BDE9
- Elsewhere: UniProt Q1BDE9 · AlphaFold DB Q1BDE9
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