MolNFT v1 · #388168 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A8MLD3)
A8MLD3: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A8MLD3)”. 16 pockets (best druggability 0.77). MolNFT v1 #388168 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A8MLD3
- Type
- protein
- Length
- 1,179 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9e5E98E011361C5888c92e2CDb7652E02Bd5C7Ed
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A8MLD3
- Pockets
- 16 · best druggability 0.77
Structure
1 distinct chain · 46% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1179 | 46% helix, 16% strand | A8MLD3 |
Pockets
16 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1023 | 0.77 | 0.79 | 81 | empty |
| 2 | 672 | 0.71 | 0.77 | 45 | empty |
| 3 | 865 | 0.69 | 0.75 | 55 | empty |
| 4 | 629 | 0.68 | 0.77 | 69 | empty |
| 5 | 213 | 0.48 | 0.75 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8MLD3
- Elsewhere: UniProt A8MLD3 · AlphaFold DB A8MLD3
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