MolNFT v1 · #388117 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q06SF2)
Q06SF2: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q06SF2)”. 20 pockets (best druggability 0.82). MolNFT v1 #388117 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q06SF2
- Type
- protein
- Length
- 2,430 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- Q06SF2
- Pockets
- 20 · best druggability 0.82
Structure
1 distinct chain · 12% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 2430 | 12% helix, 8% strand | Q06SF2 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 812 | 0.82 | 0.84 | 71 | empty |
| 2 | 982 | 0.80 | 0.81 | 85 | empty |
| 3 | 312 | 0.71 | 0.84 | 39 | empty |
| 4 | 100 | 0.55 | 0.84 | 23 | empty |
| 5 | 195 | 0.53 | 0.78 | 25 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06SF2
- Elsewhere: UniProt Q06SF2 · AlphaFold DB Q06SF2
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