MolNFT v1 · #388112 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q2VEI6)
Q2VEI6: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q2VEI6)”. 17 pockets (best druggability 0.75). MolNFT v1 #388112 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q2VEI6
- Type
- protein
- Length
- 1,392 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- Q2VEI6
- Pockets
- 17 · best druggability 0.75
Structure
1 distinct chain · 25% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1392 | 25% helix, 21% strand | Q2VEI6 |
Pockets
17 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1044 | 0.75 | 0.78 | 88 | empty |
| 2 | 843 | 0.74 | 0.78 | 97 | empty |
| 3 | 737 | 0.73 | 0.78 | 58 | empty |
| 4 | 58 | 0.67 | 0.94 | 19 | empty |
| 5 | 367 | 0.63 | 0.78 | 45 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2VEI6
- Elsewhere: UniProt Q2VEI6 · AlphaFold DB Q2VEI6
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