MolNFT v1 · #388072 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (P0C509)
P0C509: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (P0C509)”. 13 pockets (best druggability 0.78). MolNFT v1 #388072 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0C509
- Type
- protein
- Length
- 1,513 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- P0C509
- Pockets
- 13 · best druggability 0.78
Structure
1 distinct chain · 24% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1513 | 24% helix, 18% strand | P0C509 |
Pockets
13 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1015 | 0.78 | 0.80 | 88 | empty |
| 2 | 634 | 0.73 | 0.80 | 75 | empty |
| 3 | 543 | 0.70 | 0.79 | 55 | empty |
| 4 | 260 | 0.61 | 0.80 | 36 | empty |
| 5 | 102 | 0.56 | 0.85 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C509
- Elsewhere: UniProt P0C509 · AlphaFold DB P0C509
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