MolNFT v1 · #388021 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q49L08)
Q49L08: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q49L08)”. 18 pockets (best druggability 0.82). MolNFT v1 #388021 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q49L08
- Type
- protein
- Length
- 1,392 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa468e9aC7533c96f63F5B3a2d6A012D6915744dF
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- Q49L08
- Pockets
- 18 · best druggability 0.82
Structure
1 distinct chain · 24% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1392 | 24% helix, 19% strand | Q49L08 |
Pockets
18 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1176 | 0.82 | 0.83 | 110 | empty |
| 2 | 783 | 0.73 | 0.78 | 68 | empty |
| 3 | 852 | 0.71 | 0.76 | 68 | empty |
| 4 | 228 | 0.64 | 0.82 | 24 | empty |
| 5 | 571 | 0.62 | 0.74 | 53 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q49L08
- Elsewhere: UniProt Q49L08 · AlphaFold DB Q49L08
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