MolNFT v1 · #387864 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (B2LMI1)
B2LMI1: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (B2LMI1)”. 12 pockets (best druggability 0.65). MolNFT v1 #387864 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B2LMI1
- Type
- protein
- Length
- 696 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x560C3688d3CACd8C45f90Cc8822C42baFa3B0548
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- B2LMI1
- Pockets
- 12 · best druggability 0.65
Structure
1 distinct chain · 41% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 696 | 41% helix, 16% strand | B2LMI1 |
Pockets
12 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 315 | 0.65 | 0.80 | 28 | empty |
| 2 | 334 | 0.60 | 0.77 | 35 | empty |
| 3 | 268 | 0.58 | 0.77 | 30 | empty |
| 4 | 238 | 0.49 | 0.74 | 27 | empty |
| 5 | 210 | 0.49 | 0.75 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2LMI1
- Elsewhere: UniProt B2LMI1 · AlphaFold DB B2LMI1
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