MolNFT v1 · #387605 · protein

AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B5QYD8)

B5QYD8: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B5QYD8)”. 16 pockets (best druggability 0.76). MolNFT v1 #387605 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: B5QYD8
Type: protein
Length: 1,342 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xb705744687519b812661Be330f949FD78B08aBc5
Molecule: DNA-directed RNA polymerase subunit beta
UniProt: B5QYD8
Pockets: 16 · best druggability 0.76

Structure

1 distinct chain · 33% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-directed RNA polymerase subunit beta	protein	1342	33% helix, 25% strand	B5QYD8

Pockets

16 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1179	0.76	0.78	81	empty
2	413	0.67	0.80	51	empty
3	445	0.67	0.79	40	empty
4	53	0.67	0.96	17	empty
5	427	0.63	0.77	52	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B5QYD8
Elsewhere: UniProt B5QYD8 · AlphaFold DB B5QYD8

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