MolNFT v1 · #387421 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A3PV78)
A3PV78: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A3PV78)”. 14 pockets (best druggability 0.79). MolNFT v1 #387421 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A3PV78
- Type
- protein
- Length
- 1,172 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8C954013C4258592c1e35032a3C46015B3fad9A2
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A3PV78
- Pockets
- 14 · best druggability 0.79
Structure
1 distinct chain · 28% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1172 | 28% helix, 26% strand | A3PV78 |
Pockets
14 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1143 | 0.79 | 0.81 | 124 | empty |
| 2 | 55 | 0.68 | 0.97 | 16 | empty |
| 3 | 538 | 0.63 | 0.75 | 55 | empty |
| 4 | 310 | 0.58 | 0.77 | 26 | empty |
| 5 | 75 | 0.50 | 0.84 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3PV78
- Elsewhere: UniProt A3PV78 · AlphaFold DB A3PV78
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