MolNFT v1 · #387281 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q39Y13)
Q39Y13: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q39Y13)”. 16 pockets (best druggability 0.78). MolNFT v1 #387281 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q39Y13
- Type
- protein
- Length
- 1,370 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q39Y13
- Pockets
- 16 · best druggability 0.78
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1370 | 33% helix, 25% strand | Q39Y13 |
Pockets
16 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1140 | 0.78 | 0.80 | 97 | empty |
| 2 | 856 | 0.72 | 0.77 | 98 | empty |
| 3 | 512 | 0.71 | 0.81 | 47 | empty |
| 4 | 55 | 0.68 | 0.97 | 21 | empty |
| 5 | 305 | 0.62 | 0.79 | 47 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q39Y13
- Elsewhere: UniProt Q39Y13 · AlphaFold DB Q39Y13
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