MolNFT v1 · #387245 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B1LNT9)
B1LNT9: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B1LNT9)”. 18 pockets (best druggability 0.75). MolNFT v1 #387245 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B1LNT9
- Type
- protein
- Length
- 1,342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- B1LNT9
- Pockets
- 18 · best druggability 0.75
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1342 | 33% helix, 25% strand | B1LNT9 |
Pockets
18 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1194 | 0.75 | 0.78 | 84 | empty |
| 2 | 818 | 0.73 | 0.78 | 88 | empty |
| 3 | 532 | 0.73 | 0.81 | 57 | empty |
| 4 | 51 | 0.64 | 0.95 | 17 | empty |
| 5 | 363 | 0.58 | 0.76 | 55 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1LNT9
- Elsewhere: UniProt B1LNT9 · AlphaFold DB B1LNT9
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