MolNFT v1 · #386976 · protein

AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A0KQA5)

A0KQA5: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A0KQA5)”. 14 pockets (best druggability 0.78). MolNFT v1 #386976 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: A0KQA5
Type: protein
Length: 1,342 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x3e0aC98Dc58EA794394EdeA1992f0D3Ca753d03c
Molecule: DNA-directed RNA polymerase subunit beta
UniProt: A0KQA5
Pockets: 14 · best druggability 0.78

Structure

1 distinct chain · 33% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-directed RNA polymerase subunit beta	protein	1342	33% helix, 25% strand	A0KQA5

Pockets

14 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1008	0.78	0.80	77	empty
2	500	0.71	0.81	45	empty
3	397	0.65	0.79	51	empty
4	270	0.59	0.79	39	empty
5	287	0.57	0.77	34	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0KQA5
Elsewhere: UniProt A0KQA5 · AlphaFold DB A0KQA5

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