MolNFT v1 · #386956 · protein

AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A1TVT0)

A1TVT0: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A1TVT0)”. 13 pockets (best druggability 0.77). MolNFT v1 #386956 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: A1TVT0
Type: protein
Length: 1,374 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xf4ED13986579E8e227b3ED6c02276c648754EC27
Molecule: DNA-directed RNA polymerase subunit beta
UniProt: A1TVT0
Pockets: 13 · best druggability 0.77

Structure

1 distinct chain · 33% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-directed RNA polymerase subunit beta	protein	1374	33% helix, 25% strand	A1TVT0

Pockets

13 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1174	0.77	0.79	93	empty
2	573	0.72	0.80	53	empty
3	471	0.70	0.80	42	empty
4	478	0.61	0.75	70	empty
5	323	0.57	0.76	46	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A1TVT0
Elsewhere: UniProt A1TVT0 · AlphaFold DB A1TVT0

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