MolNFT v1 · #386939 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q5NQ40)
Q5NQ40: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q5NQ40)”. 3 pockets (best druggability 0.47). MolNFT v1 #386939 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5NQ40
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x384359235Af7777Ea31B29012767CdD3d1bb2cDb
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q5NQ40
- Pockets
- 3 · best druggability 0.47
Structure
1 distinct chain · 32% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 353 | 32% helix, 27% strand | Q5NQ40 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 80 | 0.47 | 0.82 | 21 | empty |
| 2 | 160 | 0.46 | 0.75 | 24 | empty |
| 3 | 64 | 0.33 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NQ40
- Elsewhere: UniProt Q5NQ40 · AlphaFold DB Q5NQ40
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