MolNFT v1 · #386857 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q2LQC9)
Q2LQC9: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q2LQC9)”. 5 pockets (best druggability 0.48). MolNFT v1 #386857 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q2LQC9
- Type
- protein
- Length
- 345 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q2LQC9
- Pockets
- 5 · best druggability 0.48
Structure
1 distinct chain · 31% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 345 | 31% helix, 27% strand | Q2LQC9 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 183 | 0.48 | 0.75 | 26 | empty |
| 2 | 90 | 0.39 | 0.77 | 23 | empty |
| 3 | 76 | 0.33 | 0.75 | 18 | empty |
| 4 | 78 | 0.31 | 0.73 | 14 | empty |
| 5 | 68 | 0.31 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2LQC9
- Elsewhere: UniProt Q2LQC9 · AlphaFold DB Q2LQC9
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