MolNFT v1 · #386803 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q2PMQ3)
Q2PMQ3: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q2PMQ3)”. 3 pockets (best druggability 0.44). MolNFT v1 #386803 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q2PMQ3
- Type
- protein
- Length
- 333 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q2PMQ3
- Pockets
- 3 · best druggability 0.44
Structure
1 distinct chain · 31% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 333 | 31% helix, 32% strand | Q2PMQ3 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.44 | 0.76 | 19 | empty |
| 2 | 77 | 0.41 | 0.79 | 20 | empty |
| 3 | 50 | 0.27 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2PMQ3
- Elsewhere: UniProt Q2PMQ3 · AlphaFold DB Q2PMQ3
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