MolNFT v1 · #386742 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (A8GPC6)
A8GPC6: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (A8GPC6)”. 4 pockets (best druggability 0.47). MolNFT v1 #386742 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A8GPC6
- Type
- protein
- Length
- 340 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- A8GPC6
- Pockets
- 4 · best druggability 0.47
Structure
1 distinct chain · 29% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 340 | 29% helix, 30% strand | A8GPC6 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 162 | 0.47 | 0.75 | 21 | empty |
| 2 | 59 | 0.34 | 0.78 | 16 | empty |
| 3 | 50 | 0.34 | 0.78 | 10 | empty |
| 4 | 50 | 0.30 | 0.77 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8GPC6
- Elsewhere: UniProt A8GPC6 · AlphaFold DB A8GPC6
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