MolNFT v1 · #386612 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q1XDJ5)
Q1XDJ5: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q1XDJ5)”. 3 pockets (best druggability 0.46). MolNFT v1 #386612 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q1XDJ5
- Type
- protein
- Length
- 311 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q1XDJ5
- Pockets
- 3 · best druggability 0.46
Structure
1 distinct chain · 31% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 311 | 31% helix, 32% strand | Q1XDJ5 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 188 | 0.46 | 0.74 | 28 | empty |
| 2 | 74 | 0.44 | 0.81 | 21 | empty |
| 3 | 57 | 0.34 | 0.78 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1XDJ5
- Elsewhere: UniProt Q1XDJ5 · AlphaFold DB Q1XDJ5
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