MolNFT v1 · #386556 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (P09562)
P09562: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (P09562)”. 4 pockets (best druggability 0.59). MolNFT v1 #386556 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P09562
- Type
- protein
- Length
- 339 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3160323f36CEcc42a4BfE9aCB70131D3Fc20b462
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- P09562
- Pockets
- 4 · best druggability 0.59
Structure
1 distinct chain · 29% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 339 | 29% helix, 32% strand | P09562 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 236 | 0.59 | 0.80 | 34 | empty |
| 2 | 146 | 0.45 | 0.76 | 17 | empty |
| 3 | 78 | 0.38 | 0.78 | 10 | empty |
| 4 | 65 | 0.31 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09562
- Elsewhere: UniProt P09562 · AlphaFold DB P09562
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